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sswm_lik

Source: R/single_variant_si_objectives.R
sswm_lik.Rd

Generates log-likelihood function of site-level selection with "strong selection, weak mutation" assumption. All arguments to this likelihood function factory are automatically supplied by ces_variant().

Usage

sswm_lik(rates_tumors_with, rates_tumors_without)

Arguments

rates_tumors_with

vector of site-specific mutation rates for all tumors with variant

rates_tumors_without

vector of site-specific mutation rates for all eligible tumors without variant